CDS
| Accession Number | TCMCG016C18168 |
| gbkey | CDS |
| Protein Id | OMO69791.1 |
| Location | complement(join(14520..14658,15207..15326,15429..15607,15912..16103,16205..16243,16349..16448,16545..16609,17282..17470,18912..18951,19050..19689,20258..21239)) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_19266 |
Protein
| Length | 894aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01011965.1 |
| Definition | DNA repair protein Sae2/CtIP [Corchorus capsularis] |
| Locus_tag | CCACVL1_19266 |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Protein gamma response |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13096
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000003
[VIEW IN EMBL-EBI] GO:0006950 [VIEW IN EMBL-EBI] GO:0006974 [VIEW IN EMBL-EBI] GO:0007276 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009314 [VIEW IN EMBL-EBI] GO:0009628 [VIEW IN EMBL-EBI] GO:0009987 [VIEW IN EMBL-EBI] GO:0010212 [VIEW IN EMBL-EBI] GO:0019953 [VIEW IN EMBL-EBI] GO:0022414 [VIEW IN EMBL-EBI] GO:0032501 [VIEW IN EMBL-EBI] GO:0032504 [VIEW IN EMBL-EBI] GO:0033554 [VIEW IN EMBL-EBI] GO:0044703 [VIEW IN EMBL-EBI] GO:0048609 [VIEW IN EMBL-EBI] GO:0050896 [VIEW IN EMBL-EBI] GO:0051704 [VIEW IN EMBL-EBI] GO:0051716 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAGGGGCACCTTGAACAATCTCCCAGATTGGGGCTTGCCATCGACAGCGATGATGTCAAGTACATTTCTGGGTTAAGTACCATACTGGTAGCTACAATTCAGGAAGCTAAGGACAGAATTTCTCAGATTGAGTACATCTTTTGCAGTCAGCTCTACCCAAATTTCCAGTTAAAATCTAAAGGCTTGCAGAAAATATACACCGAGGCTAAGAAAGCTGCAGAAGATGCATGGACGAACAAGGAAGCTGAGTTCACACTCCAAATAGAGAAACTTCAACTTGAAAAGAAGCAGGTCCTTGAAGAGAACCAGTCTCTCATGCTTGACAAGGAAAAGCTACTAAAGGAGCAGGACCAGAAAATCAGACAACTTCTTCTGGAACAAGAGGATCTAAAAGAAAACCTTTTGCTCAAGTGTAAGGAAGTTGATGAGGGGATGGAATTGCAGAATAAACTAATGCAGTTGGTTCAAGAGAATGCCTCTGTGGTAGCTGATAAGGGTAAAGAACTAAAAGGGCATGAAGAGAAAACAAACATTCTTCTCACTGATTTGAACACCCTGCAGAAAAAGGTTGAAGCACTCCAGCAGGAGCTTGGAGAAAAGACTCAGCAAGTTGCTCATTGGAAGAAGTTGTCCAAAGATGTACTTAAAAAGATCGAATCGCAAGCCCTTGATAGTATGCATAATGAAGAGCAGCTGATCCAGTGTAACAAGGAGAAGAAGCTACTCATGGCCAATTTTGGGAAATTGAAGGAGAATTATGATGAACTCCATTTGGTACTTGGACAGAAGACTAAAGAAGTTGAGGAAGGAAGAAAATTGCAGGAGCAGTTACTTGCACAAATTGATTTTAAAAGCTCAGAAATTTTAAAGAATAACCAGCAGTTGGCTGAGCATGGGAAACAGAAAGAGCTACTTCTGGCCCAAGTAAAAGGTTTGGAAGAGAAAGTCAATTCTCTCCAGGTTAAACTTAGAGAAAGTGATGCTGAAACCAAAATTTCAAATATTCCTACAGTTGCTTTTGACACAAGAAGAATGAAGGATGTAATTGGCTTAGGTGTTGACTTGGAGGATAGGAGAGGGGCCAAACCAGTTGAAACCTCTATCACCCACACTCCCACTTCCAGTTTCCTCACTCCAAAACGTCCTTCAACTGTGAAATCTAATGCTATAGCTGGTACCAAGCGATCTGTTTCTGGTTGGAGAGATACTAGGTCCCATCAGAGCGAAGCTGGGGCCGATCCGCATGATGATTTTCTTGACACTCCGCTGGAGAATATTAGAGGAAACCTGAAAAAAGCCATGAAGGAAGAAGCTGAAGGTCTTCCAGATCCAGAACACATGAATGTTGATAGCTCAGATGATGATGAGACTCAGGATGTTAGTGTTGAAAAGAGGCCACAAAAACAAGAGACACCATTGCAAATAGCAGAAAAAGGAAGTTTTAAGTATGTGGAACCAGTACGAAAGAAAGCAGAGAGGGAAAAGTTGAGAGGATTTGAATGCAAGCAATGTAAGAAATTTTATGATGCTGTTCTTAATCATGGAGGTGAGGACAATGAAGATGACAAGAAGAATTTTCGCTGCGAGCATCATGATGGTGTATCTAGGCACCGGTACAAGTTTAATAGACATTCAAGGCATATTTTTAGTCTTCAATCTCCAGTGGATCTGTTGGTGGAATTGATCGAACACCCCATTCTTGTATCTGCCTCACATTCTTTCAAATCTATCCAGGAGAGGAGAATCTCAGCATCCATGGACACTGATTTAGCAACATTGTCAAACAACCCAAAATATGTTTATTTATTCCAGAGAGAATACGCAACCGTTGATCCTGCACTTGTCCATTATGTCGGCACTGACGAAGCAACAACCTGTGTGGGCCTAGTGATTCGAAACCGGAGAAATGGCATGACCTCTGTTGCCCACATTGATTCTCCAAAATTTGTGGATATTGGCATCATCCAGATGTTATCTCTAGTTGTTGATCAAAATTCTCCAATTGATTTGGATGTGCATTTAGTTGGTGGATTTGAAGATGTTTCTCCTAATCATGCTAAAGCCAGGAGAACATCAGAGGAGAATCCAAGATTGGATGGTTATTCATTTCCTTTGTGTACAAAAATAGTTGAAACTATGCAGAAGAGATGTGAAAATTTTCACATTCAGACTCTGTGTGTTCTTGGACATAACACCAAAAAGGATTCTGAAGGAAATGCATATCCCATTTTCAATGGGTTCCTGGTAGAACCTTCTACCGGATCCCTCATTCCTGCAAGCTTTGATAGGACTGCTCGCTGTCCAGATGAAATTGTCCGAAGACTTCGAGTCTCCGCTTCATATGATGACCACAGTTGGCACGGGAAATTACTGGATACTTATGACACGAAAACTGACCGATTCGTTATTGCTCCTTGCAGTTGGAACAGACGCCTTGTACAAATGGCTTTGTCACTGCAAAGTCTTTCTGACTCTGAAATTCTTGCTACATGCTCCACGTCACATTCTGCTGAAGGTCCAGATTTTGTTGACAATGAAAGAAGGATGTGGAACTATTTGATTGAACATCCAGACTGGAAAAAAACTTTTCCCAAGAGGCAACCACGCGTCTTTGAAAGGACAGCTGAGGGAGGCTGGAAAAGTGCTGATTTTCATGACAAGGATAGTGGTTGCAGATCCTAG |
| Protein: MEGHLEQSPRLGLAIDSDDVKYISGLSTILVATIQEAKDRISQIEYIFCSQLYPNFQLKSKGLQKIYTEAKKAAEDAWTNKEAEFTLQIEKLQLEKKQVLEENQSLMLDKEKLLKEQDQKIRQLLLEQEDLKENLLLKCKEVDEGMELQNKLMQLVQENASVVADKGKELKGHEEKTNILLTDLNTLQKKVEALQQELGEKTQQVAHWKKLSKDVLKKIESQALDSMHNEEQLIQCNKEKKLLMANFGKLKENYDELHLVLGQKTKEVEEGRKLQEQLLAQIDFKSSEILKNNQQLAEHGKQKELLLAQVKGLEEKVNSLQVKLRESDAETKISNIPTVAFDTRRMKDVIGLGVDLEDRRGAKPVETSITHTPTSSFLTPKRPSTVKSNAIAGTKRSVSGWRDTRSHQSEAGADPHDDFLDTPLENIRGNLKKAMKEEAEGLPDPEHMNVDSSDDDETQDVSVEKRPQKQETPLQIAEKGSFKYVEPVRKKAEREKLRGFECKQCKKFYDAVLNHGGEDNEDDKKNFRCEHHDGVSRHRYKFNRHSRHIFSLQSPVDLLVELIEHPILVSASHSFKSIQERRISASMDTDLATLSNNPKYVYLFQREYATVDPALVHYVGTDEATTCVGLVIRNRRNGMTSVAHIDSPKFVDIGIIQMLSLVVDQNSPIDLDVHLVGGFEDVSPNHAKARRTSEENPRLDGYSFPLCTKIVETMQKRCENFHIQTLCVLGHNTKKDSEGNAYPIFNGFLVEPSTGSLIPASFDRTARCPDEIVRRLRVSASYDDHSWHGKLLDTYDTKTDRFVIAPCSWNRRLVQMALSLQSLSDSEILATCSTSHSAEGPDFVDNERRMWNYLIEHPDWKKTFPKRQPRVFERTAEGGWKSADFHDKDSGCRS |